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标题:【求助】如何让3kD的蛋白 在SDS-PAGE中清晰可见?

xyw5[使用道具]
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【求助】如何让3kD的蛋白 在SDS-PAGE中清晰可见?


刚开始操作SDS-PAGE,目的蛋白是3kD左右,这么小的蛋白,不知道怎么操作才好。
已经做了一些改进,SDS-尿素什么的。可效果还是不太好,连Marker的小条带都看不到。希望得到大家的指教。
谢谢!
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BOSS2011[使用道具]
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加大胶浓度,加大上样量
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ladyhuahua[使用道具]
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tris-glycine gels 15%的胶最佳分离范围为6.5~200KD
所以你的3KD的蛋白很难分离开来。
建议使用Tris-tricine gels,
16.5% 分离范围 1~100KD
最佳分离范围 2~70KD
以下的PROTOCOL是最为流行的Tris-tricine 系统(Separating gel中使用的是甘油,少数人加入尿素),我使用过的,效果很好!(见下文, 分为两个部分:1. Stock Solutions for Tris-Tricine-SDS-PAGE (16.5% T, 6.0% C);2. Immediately Used Solutions for Tris-Tricine-SDS-PAGE (16.5% T, 6.0% C))( 各个组分的量可以成比例变化)(格式有些变化,请整理一下)(乱码的那个字为微micro )
当您有疑问时可参考原始文献(目前几乎所有的Tris-Tricine-SDS-PAGE 都是参考了以下网络硬盘上的这篇文献),原始参考文献为两位的德国人发表在Anal. Biochem.上题为Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. 。到这里下载:cuturl('http://free.ys168.com/?ajzhangyu')。 dxy 求助文件夹中,题为Tris-Tricine SDS-PAGE.pdf
Stock Solutions for Tris-Tricine-SDS-PAGE (16.5% T, 6.0% C)
Anode buffer (1 h)
MW 500 ml
0.2 M Tris, pH 8.9 121.14 12.11 g
Dissolve 12.11 g Tris base in 200 ml dH2O. Adjust pH to 8.9 with 1 N HCl. Add dH2O to 500 ml total volume. Filter the solution through a 0.45 µm filter and store at 4°C.
Cathode buffer (1-2 h)
MW 500 ml
0.1 M Tris, pH 8.25 121.14 6.055 g
0.1 M Tricine 179.2 8.96 g
0.1% (w/v) SDS 288.38 0.5 g
Dissolve 6.055 g Tris base and 8.96 g tricine in a total volume of 500 ml dH2O. Filter the solution through a 0.45 µm filter, add 0.5 g electrophoresis-grade SDS, and store at 4°C. It is not necessary to adjust the pH of this buffer, which should be around 8.25.
Gel buffer (10 h)
MW 500 ml
3.0 M Tris, pH 8.45 121.14 181.65 g
0.3% SDS 288.38 1.5 g
Dissolve 181.65 g Tris base and 1.5 g electrophoresis-grade SDS in 300 ml dH2O. Adjust the pH of the solution to 8.45 with concentrated HCl. Bring to final volume of 500 ml with dH2O. Store at 4°C.
Separating gel monomer (49.5% T, 6.0% C) (2-3 h)
MW 200 ml 300 ml
46.5% (w/v) Acr 71.08 93.0 g 139.5 g
3.0% (w/v) Bis 154.17 6.0 g 9.0
Mix 93.0 g acrylamide and 6.0 g N, N'-methylene-bisacrylamide in a total volume of 200 ml dH2O. Filter solution through a 0.45 µm filter and store at 4°C protected from light. Discard after 30 days.
CAUTION: Acrylamide and bisacrylamide are potent neurotoxins and are absorbed through the skin. Wear a mask while weighing the powder. Gloves and a lab coat should be worn when handling the solution. Do not mouth pipette.
Stacking gel monomer (49.5% T, 3.0% C) (2-3 h)
MW 100 ml 200 ml
48.0% (w/v) Acr 71.08 48.0 g 96.0 g
1.5% (w/v) Bis 154.17 1.5 g 3.0 g
Mix 96.0 g acrylamide and 3.0 g N, N'-methylene-bisacrylamide in a total volume of 200 ml dH2O. Filter solution through a 0.45 µm filter and store at 4°C protected from light. Discard after 30 days.
Immediately Used Solutions for Tris-Tricine-SDS-PAGE (16.5% T, 6.0% C)
Separating gel (16.5% T, 6.0% C)
One-pack gel(3.3 ml)
Separating gel monomer 1.10 ml
Gel buffer 1.10 ml
glycerol 0.34 ml
ddH2O 0.76 ml
10% (w/v) APS 33 l
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ladyhuahua[使用道具]
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TEMED 3.3 l
Total volume ~ 3.30 ml
In a 50-ml conical tube, mix 10.0 ml of the separating gel monomer, 10.0 ml of the gel buffer, 3.1 ml glycerol, and 6.9 ml dH2O. Degas under vacuum 10 to 15 minutes. Add 100 µl of 10% ammonium persulfate and 20 µl TEMED. Swirl gently to mix. Use immediately. Produces 30 ml of separating gel, sufficient for four minigels. (The amount of each ingredient here is not consistent with that in the table)
Spacer gel (10.0% T, 3.0% C)
One-pack gel(1.0 ml)
Stacking gel monomer 0.21 ml
Gel buffer 0.33 ml
ddH2O 0.46 ml
10% (w/v) APS 5 l
TEMED 0.5 l (or 1.0 l)
Total volume ~ 1.0 ml
In a 50-ml conical tube, mix 2.0 ml of the stacking gel monomer, 3.3 ml of the gel buffer, and 4.7 ml dH2O. Degas under vacuum 10 to 15 minutes. Add 50 µl of 10% ammonium persulfate and 10 µl TEMED. Swirl gently to mix. Use immediately. Produces 10 ml of stacking gel, sufficient for four minigels. (The amount of each ingredient here is not consistent with that in the table)
Stacking gel (4.0% T, 3.0% C)
One-pack gel (2.0 or 1.0 ml)
Stacking gel monomer 0.08 ml
Gel buffer 0.25 ml
ddH2O 0.67 ml
10% (w/v) APS 5 l
TEMED 0.5 l (or 1.0 l)
Total volume ~ 1.00 ml
In a 50-ml conical tube, mix 0.8 ml of the stacking gel monomer, 2.5 ml of the gel buffer, and 6.7 ml dH2O. Degas under vacuum 10 to 15 minutes. Add 50 µl of 10% ammonium persulfate and 10 µl TEMED. Swirl gently to mix. Use immediately. Produces 10 ml of stacking gel, sufficient for four minigels. (The amount of each ingredient here is not consistent with that in the table)
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BUK[使用道具]
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2004年生物工程杂志上面有一篇文章,
cuturl('http://www.ebiotrade.com/newsf/2005-9/2005916184807.htm')这是生物通上面的网址.这篇文章里有一个连接可以看到一篇文章:有效分离1KD小肽的方法.你可以看看.
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jujuba[使用道具]
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建议用tricine-SDS-PAGE,15%或者16。5%肯定可以的。
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birdfish[使用道具]
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可以尝试用银染代替考马斯亮蓝,银染的分辨率好像要比较高吧
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